Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs6794668 | chr3:99986843 | C/T | 2.19E-5 | 214 | 16.45 | 18.47 | 4.67 | KM Plot |
KIRP | rs67972765 | chr17:45318326 | G/A | 1.66E-11 | 213 | 14.53 | 24.9 | 0.43 | KM Plot |
KIRP | rs6803222 | chr3:49665976 | T/G | 0.000625 | 213 | 13.73 | 16.93 | 25.33 | KM Plot |
KIRP | rs68072215 | chr6:26377927 | T/C | 3.8E-7 | 212 | 16.43 | 13.38 | 9.77 | KM Plot |
KIRP | rs680832 | chr18:5968526 | C/T | 1.1E-5 | 214 | 16.47 | 12.1 | 9.92 | KM Plot |
KIRP | rs6808469 | chr3:99961784 | T/C | 9.44E-9 | 214 | 16.47 | 18.47 | 4.37 | KM Plot |
KIRP | rs68094410 | chr3:100008618 | G/A | 4.42E-5 | 211 | 16.43 | 18.88 | 4.67 | KM Plot |
KIRP | rs68112369 | chr6:26365759 | T/C | 7.79E-9 | 211 | 16.47 | 13.6 | 9.77 | KM Plot |
KIRP | rs68167482 | chr6:110797945 | T/TC | 7.96E-8 | 208 | 6.7 | 13.3 | 18.23 | KM Plot |
KIRP | rs6870359 | chr5:176710065 | C/G | 4.29E-7 | 212 | 4.88 | 19.27 | 15.2 | KM Plot |
KIRP | rs6875481 | chr5:34518848 | T/C | 4.36E-7 | 209 | 6.48 | 12.6 | 17.02 | KM Plot |
KIRP | rs6882591 | chr5:176546460 | G/A | 2.66E-7 | 211 | 14.97 | 19.27 | 9.77 | KM Plot |
KIRP | rs6889220 | chr5:176693888 | G/A | 3.89E-7 | 211 | 4.88 | 19.27 | 15.33 | KM Plot |
KIRP | rs6920997 | chr6:110797612 | A/G | 7.96E-8 | 208 | 6.7 | 13.17 | 18.47 | KM Plot |
KIRP | rs6922017 | chr6:110797905 | G/C | 7.96E-8 | 208 | 6.7 | 13.3 | 18.23 | KM Plot |